In order for us to provide better support, we need to see the log generated by Citra. This guide will walk you through how you can obtain the log file: How to Upload the Log File.
Unfortunately the drivers for MediaTek are very bad for OpenGL ES apparently even worse than Samsung’s Exynos chips. The best drivers are for Qualcomm’s Snapdragon chips.
This is basically a manufacturer issue.
If you want to check with a benchmark, you can use like GFXBench. Here are my scores on an LG G8s ThinQ (has Snapdragon 855):
The Redmi Note 9 seems to be in the same price range as the Redmi Note 8T and Moto G8 Power which have Snapdragon 665. Those would run Citra considerably better.