Issues recognizing controllers in steam deck game mode

In Steam Deck game mode all controllers are recognized as steam virtual gamepads instead of as their actual controller. This would be fine except it mean HD rumble and motion controls don’t work when I’m using a switch pro controller or joycon. Everything works fine when I launch in desktop mode, unless I launch from steam in desktop mode where they aren’t recognized at all. I tried turning of steam input and it got it to be recognized as a switch pro controller but no motion

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