I use a wired Xbox 360 controller and I used the thread below to change my config file.
The problem is my config layout is not like the one presented here. And another problem is that citra doesn’t save my settings. When I open input settings and set them to default then press ok, it just reverts back once I exit and open Citra again.
Operating System: Windows 10 Pro 64-bit
CPU: Intel i5 7500U
GPU: Nvidia GeForce 940MX
Citra Version (found in title bar): Citra Nightly 1442
Game: Pokémon Ultra Moon
Screenshot of Issue (include the full Citra window including titlebar):